Natural Science Hub Search function
Type your keywords and we will find the results

-
Chromosomal inversion is an important structural variation that usually suppresses recombination and is critical for key genotype fixation. In a previous study, an 11.47 Mb recombination suppression region was identified in the yellow-green leaf locus on chromosome 1, but the cause of recombination suppression is still unclear. In this study, chlorophyll and carotenoid contents were found to be significantly decreased in the yellow-green leaf mutant YL-1. Genome assembly and comparative analysis revealed that two large inversions in YL-1 were responsible for the severe recombination suppression in the locus. Analyses with inversion-specific markers revealed that the inversions were present in 44 (including all wild cabbage; INV1 and INV2) of 195 cabbage inbred lines and 15 (INV1) ornamental kale inbred lines, indicating that these species with INV1 or INV2 may have evolved much earlier than other types of cabbage. Analyses with inversion-correlated markers revealed that the genotypes of CoINV1, CoINV2 and CoINV3 were highly correlated with INV1 and INV2, indicating that INVs could fix the key genotypes of the involved region. In addition, a 5.87 Mb assembly inversion was identified at the locus in the TO1000 genome by genome comparative analysis. This study provides new insight into the recombination suppression mechanism of chromosomal inversion and the application of genome fragment fixation in cabbage breeding.
Read More on PubMed -
Salinity Influenced Proximate, Minerals, Anti-Nutrients and Phytochemical Composition of Kunth (Wild Cabbage): A Promising Edible Halophyte.
- Date:
- Author: Ngxabi S | Jimoh MO | Sogoni A | Laubscher CP | Rautenbach F | Kambizi L |
Climate change, drought, and soil salinization present huge limitations to global agricultural output, which threatens food security. This necessitates the cultivation and domestication of wild edible halophytes as alternatives to mainstream food crops, especially in arid and semi-arid regions. is one of the under-researched and underutilized edible halophytes native to South Africa. The plant was used as a food source by Khoisan people in the past although its edibility and nutritional capacity are undocumented. Thus, the current study explored the effect of varying salinity concentrations on minerals, proximate, phytochemical, and anti-nutrient composition of to evaluate its edibility and promote its cultivation among South African households. Plants were subjected to varying salinity treatments from 0, 50, 100,150, and 200 mM prepared by adding sodium chloride (NaCl) to the nutrient solution. Salinity significantly influenced the mineral, proximate, antinutrient, and phytochemical composition of . Control and 50 mM treatments recorded significantly higher macro and micronutrient content in the flower buds and leaves, except for heavy metals such as Zn and Cu, which increased with increasing salinity and significantly higher in the roots. Leaves under low salinity treatments recorded higher moisture and protein content, while leaves also recorded higher ash content under high salinity. On the other hand, flower buds under low salinity recorded significantly high fat and NDF composition. Phytochemicals and antinutrients increased with increasing salinity concentrations. The low antinutrient content and high nutritional, mineral and phenolic contents validate the edibility and suitability of for human consumption.
Read More on PubMed -
Genetic Variation of Turnip Yellows Virus in Arable and Vegetable Brassica Crops, Perennial Wild Brassicas, and Aphid Vectors Collected from the Plants.
- Date:
- Author: Pimenta RJG | Macleod K | Babb R | Coleman K | MacDonald J | Asare-Bediako E | Newbert MJ | Jenner CE | Walsh JA |
(TuYV; , ) infects and causes yield losses in a range of economically important crop species, particularly the Brassicaceae. It is persistently transmitted by several aphid species and is difficult to control. Although the incidence and genetic diversity of TuYV has been extensively investigated in recent years, little is known about how the diversity within host plants relates to that in its vectors. Arable oilseed rape () and vegetable brassica plants (), wild cabbage (), and aphids present on these plants were sampled in the field in three regions of the United Kingdom. High levels of TuYV (82 to 97%) were detected in plants in all three regions following enzyme-linked immunosorbent assays. TuYV was detected by reverse transcription polymerase chain reaction in aphids collected from plants, and TuYV sequences were obtained. Two TuYV open reading frames, ORF0 and ORF3, were partially sequenced from 15 plants, and from one aphid collected from each plant. Comparative analyses between TuYV sequences from host plants and collected from respective plants revealed differences between some ORF0 sequences, which possibly indicated that at least two of the aphids might not have been carrying the same TuYV isolates as those present in their host plants. Maximum likelihood phylogenetic analyses including published, the new TuYV sequences described above, 101 previously unpublished sequences of TuYV from oilseed rape in the United Kingdom, and 13 also previously unpublished sequences of TuYV from oilseed rape in Europe and China revealed three distinct major clades for ORF0 and one for ORF3, with some distinct subclades. Some clustering was related to geographic origin. Explanations for TuYV sequence differences between plants and the aphids present on respective plants and implications for the epidemiology and control of TuYV are discussed.
Read More on PubMed -
Antioxidant and Antiproliferative Activities of Kale ( L. Var. DC.) and Wild Cabbage ( Ten.) Polyphenolic Extracts.
- Date:
- Author: Lučić D | Pavlović I | Brkljačić L | Bogdanović S | Farkaš V | Cedilak A | Nanić L | Rubelj I | Salopek-Sondi B |
Brassicaceae are rich in healthy phytochemicals that have a positive impact on human health. The aim of this study was to analyze the phenolic compounds and antioxidant and anticancer potential of traditional Croatian kale ( L. var. DC.) and wild cabbage ( Ten.) extracts. The phenolic groups and antioxidant activity were determined by spectrophotometry, selected phenolic compounds (ferulic acid, sinapic acid, salicylic acid, kaempferol, and quercetin) were analyzed by LC-MS/MS, and anticancer potential was evaluated in vitro using HeLa cells. The extracts of both plant species are rich in phenolic compounds and showed significant antioxidant activity at similar levels. LC-MS/MS detected sinapic acid as the most abundant phenolic acid, followed by ferulic acid, while salicylic acid was present at lower concentrations. A comparative analysis showed that wild cabbage contained significantly more sinapic acid, while kale contained more kaempferol and quercetin. Both extracts at a concentration of 50 µg mL showed an antiproliferative effect on HeLa cells, while they did not affect the proliferation of normal human skin fibroblasts. Wild cabbage extract also showed an antiproliferative effect on HeLa cells at a lower applied concentration of 10 µg mL of extracts. The clonogenic analysis also revealed the inhibitory effect of the extracts on HeLa colony growth.
Read More on PubMed -
Cabbage butterfly as bioindicator species to investigate the genotoxic effects of PM.
- Date:
- Author: Macrì M | Gea M | Piccini I | Dessì L | Santovito A | Bonelli S | Schilirò T | Bonetta S |
Atmospheric pollution poses a serious threat to environment and human health, and particulate matter (PM) is one of the major contributors. Biological effects induced by PM are investigated through in vitro assays using cells and by in vivo tests with laboratory model animals. However, also the estimation of adverse effects of pollutants, including airborne ones, on wild animals, such as insects, is an essential component of environmental risk assessment. Among insects, butterflies are sensitive to environmental changes and are important wild pollinators, so they might be suitable as environmental bioindicator species. The aim of this study was to evaluate the suitability of a wild cabbage butterfly species (Pieris brassicae) as a bioindicator organism to assess the genotoxic effects of PM collected in different sites. PM was collected from April to September in urban, suburban, and rural sites. P. brassicae larvae were reared in laboratory under controlled conditions on cabbage plants and exposed to PM organic extracts or dimethyl sulfoxide (controls) through vaporization. After exposure, larvae were dissected, and cells were used for comet assay. All PM extracts induced significant DNA damage in exposed larvae compared to controls and the extract collected in the most polluted site caused the highest genotoxic effect. In conclusion, the study suggested that butterflies, such as P. brassicae, could be applied as sensitive and promising bioindicators to investigate air quality and PM genotoxicity. Indeed, the use of these organisms allows the detection of genotoxic effects induced by PM sampled also in low-polluted areas.
Read More on PubMed -
Biochar application was reported to influence soil phosphorus (P) leaching, but the reports are conflicting, and could be related to soil depth and water management. A field trial of a Wild Cabbage-Chinese Cabbage rotation was used to investigate the effect of biochar application and irrigation volume on P leaching risk in fluvisol soil profiles (0-20 cm, 20-50 cm, 50-100 cm) in the Chaobai River basin. The experiment included two biochar levels [0 (-BC), 30 t/hm (+BC)], and two irrigation levels [conventional irrigation (CI) and water-saving irrigation (WSI)]. The irrigation rate of WSI was 80% of CI. The results demonstrated that there was no significant difference in soil leachable P in the soil profiles under the two irrigation volumes, while biochar application tended to increase soil leachable P in the top layer soil (0-20 cm) and subsurface layer soil (20-50 cm) irrespective of the irrigation rate. The average value of the P leaching "change point" in the soil profiles with +BC was significantly higher than that with -BC (0-20 cm: 35.52 mg kg vs. 25.86 mg kg; 20-50 cm: 27.61 mg kg vs. 20.02 mg kg). Additionally, the P leaching risk was observed in all top layer soil (0-20 cm) irrespective of irrigation rate and biochar application, and the P leaching risk in the subsurface layer (20-50 cm) with +BC was lower than that with -BC, especially under WSI. Therefore, it is recommended that biochar application combined with water-saving irrigation could be used as a measure for controlling soil phosphorus leaching under open field vegetable rotation in the alluvial soil of Chaobai River basin.
Read More on PubMed -
Evaluating costs of heavy metal tolerance in a widely distributed, invasive butterfly.
- Date:
- Author: Shephard AM | Zambre AM | Snell-Rood EC |
Organismal tolerance to environmental pollution is thought to be constrained by fitness costs, where variants with higher survival in polluted environments have lower performance in nonpolluted environments. Yet, costs are not always detected in empirical studies. One hypothesis suggests that whether tolerance costs emerge depends on the degree of heterogeneity populations experience with respect to pollution exposure. For instance, in populations confined to local environments where pollution is persistent, selection may favour alleles that enhance pollution tolerance but reduce performance in nonpolluted environments (costs). However, in broadly distributed populations that undergo selection in both polluted and nonpolluted patches, costs should be eroded. Understanding tolerance costs in broadly distributed populations is relevant to management of invasive species, which are highly dispersive, wide ranging, and often colonize disturbed or polluted patches such as agricultural monocultures. Therefore, we conducted a case study quantifying costs of tolerance to zinc pollution (a common heavy metal pollutant) in wild cabbage white butterflies (). This wide ranging, highly dispersive and invasive pest periodically encounters metal pollution by consuming plants in urban and agricultural settings. In contrast to expected costs of tolerance, we found that cabbage white families with greater zinc tolerance also produced more eggs and had higher reproductive effort under nonpolluted conditions. These results contribute to a more general hypothesis of why costs of pollution tolerance vary across studies: patchy selection with pollutants should erode costs and may favour genotypes that perform well under both polluted and nonpolluted conditions. This might partly explain why widely distributed invasive species are able to thrive in diverse, polluted and nonpolluted habitats.
Read More on PubMed -
Feral populations of along Atlantic coasts in western Europe.
- Date:
- Author: Mittell EA | Cobbold CA | Ijaz UZ | Kilbride EA | Moore KA | Mable BK |
There has been growing emphasis on the role that crop wild relatives might play in supporting highly selected agriculturally valuable species in the face of climate change. In species that were domesticated many thousands of years ago, distinguishing wild populations from escaped feral forms can be challenging, but reintroducing variation from either source could supplement current cultivated forms. For economically important cabbages (Brassicaceae: ), "wild" populations occur throughout Europe but little is known about their genetic variation or potential as resources for breeding more resilient crop varieties. The main aim of this study was to characterize the population structure of geographically isolated wild cabbage populations along the coasts of the UK and Spain, including the Atlantic range edges. Double-digest restriction-site-associated DNA sequencing was used to sample individual cabbage genomes, assess the similarity of plants from 20 populations, and explore environment-genotype associations across varying climatic conditions. Interestingly, there were no indications of isolation by distance; several geographically close populations were genetically more distinct from each other than to distant populations. Furthermore, several distant populations shared genetic ancestry, which could indicate that they were established by escapees of similar source cultivars. However, there were signals of local adaptation to different environments, including a possible relationship between genetic diversity and soil pH. Overall, these results highlight wild cabbages in the Atlantic region as an important genetic resource worthy of further research into their relationship with existing crop varieties.
Read More on PubMed -
Host plant nutrient contents influence nutrient contents in Bradysia cellarum and Bradysia impatiens.
- Date:
- Author: Gou Y | Quandahor P | Zhang Y | Coulter JA | Liu C |
The chive maggot Bradysia cellarum and the fungus gnat B. impatiens are two primary root pests of plants, which can coexist on the same host plants and are the devastating pests on liliaceous crops and edible fungi. Their growth and development are affected by the nutrient contents of their host plants. In this study, we assessed the effects of different host plant nutrients on the nutrient contents of these two Bradysia species. The nutrients of the chive (Allium tuberosum Rottl. ex Spreng.), board bean (Vicia faba L.), lettuce (Lactuca sativa L. var. ramosa Hort.), cabbage (Brassica oleracea L.), wild cabbage (Brassica oleracea var. capitata rubra) and pepper (Capsicum annuum L.) roots were determined, and their effect on nutrient content of the two Bradysia species after feeding on the host plant for three continuous generations were evaluated. The results show that chive and B-bean contained higher levels of protein, free amino acid, soluble sugar and starch than others. As a result, the soluble sugar, fat and protein contents were significantly higher in both Bradysia species reared on chive and B-bean than on cabbage, lettuce, W-cabbage and pepper, suggesting nutritional preference of these insects. Based on our results, we concluded that the two Bradysia species displayed nutrient preference toward chive and B-bean, which provides a reference for understanding their host plant range and for control of the insect species via field crop rotations.
Read More on PubMed -
Human-mediated dispersal and disturbance shape the metapopulation dynamics of a long-lived herb.
- Date:
- Author: Bullock JM | Wichmann MC | Hails RS | Hodgson DJ | Alexander MJ | Morley K | Knopp T | Ridding LE | Hooftman DAP |
As anthropogenic impacts on the natural world escalate, there is increasing interest in the role of humans in dispersing seeds. But the consequences of this Human-Mediated Dispersal (HMD) on plant spatial dynamics are little studied. In this paper, we ask how secondary dispersal by HMD affects the dynamics of a natural plant metapopulation. In addition to dispersal between patches, we suggest within-patch processes can be critical. To address this, we assess how variation in local population dynamics, caused by small-scale disturbances, affects metapopulation size. We created an empirically based model with stochastic population dynamics and dispersal among patches, which represented a real-world, cliff-top metapopulation of wild cabbage Brassica oleracea. We collected demographic data from multiple populations by tagging plants over eight years. We assessed seed survival, and establishment and survival of seedlings in intact vegetation vs. small disturbances. We modeled primary dispersal by wind using field data and used experimental data on secondary HMD by hikers. We monitored occupancy patterns over a 14-yr period in the real metapopulation. Disturbance had large effects on local population growth rates, by increasing seedling establishment and survival. This meant that the modeled metapopulation grew in size only when the area disturbed in each patch was above 35%. In these growing metapopulations, although only 0.2% of seeds underwent HMD, this greatly enhanced metapopulation growth rates. Similarly, HMD allowed more colonizations in declining metapopulations under low disturbance, and this slowed the rate of decline. The real metapopulation showed patterns of varying patch occupancy over the survey years, which were related to habitat quality, but also positively to human activity along the cliffs, hinting at beneficial effects of humans. These findings illustrate that realistic changes to dispersal or demography, specifically by humans, can have fundamental effects on the viability of a species at the landscape scale.
Read More on PubMed